Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BN1205_009585 | BN1205_060660 | A0A125YLH0 | B9Q6K4 | MSP (Major sperm protein) domain-containing protein. | START domain-containing protein. | 0.677 |
BN1205_009585 | TGVEG_264760 | A0A125YLH0 | V4ZN13 | MSP (Major sperm protein) domain-containing protein. | Oxysterol-binding protein. | 0.967 |
BN1205_060660 | BN1205_009585 | B9Q6K4 | A0A125YLH0 | START domain-containing protein. | MSP (Major sperm protein) domain-containing protein. | 0.677 |
BN1205_060660 | TGVEG_264760 | B9Q6K4 | V4ZN13 | START domain-containing protein. | Oxysterol-binding protein. | 0.417 |
BN1205_060660 | TGVEG_322120 | B9Q6K4 | V4ZGQ0 | START domain-containing protein. | Protein kinase domain protein. | 0.409 |
TGVEG_264760 | BN1205_009585 | V4ZN13 | A0A125YLH0 | Oxysterol-binding protein. | MSP (Major sperm protein) domain-containing protein. | 0.967 |
TGVEG_264760 | BN1205_060660 | V4ZN13 | B9Q6K4 | Oxysterol-binding protein. | START domain-containing protein. | 0.417 |
TGVEG_322120 | BN1205_060660 | V4ZGQ0 | B9Q6K4 | Protein kinase domain protein. | START domain-containing protein. | 0.409 |