STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1205_102510Amine oxidase, flavin-containing domain-containing protein. (3802 aa)    
Predicted Functional Partners:
TGVEG_226950A
IgA-specific metalloendopeptidase.
   
 
 0.971
BN1205_092350
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.857
BN1205_068190
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.854
BN1205_002220
Histone deacetylase, putative.
   
 0.854
TGVEG_275680
ELM2 domain-containing protein.
   
 0.847
BN1205_073350
Histone H3; Belongs to the histone H3 family.
    
 0.826
BN1205_071480
Histone H3; Belongs to the histone H3 family.
    
 0.826
BN1205_066490
Histone H3 centromeric CENH3.
    
 0.826
BN1205_053260
Stress responsive a/b barrel domain-containing protein.
  
 
 0.760
BN1205_091750
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.745
Your Current Organism:
Toxoplasma gondii
NCBI taxonomy Id: 432359
Other names: T. gondii VEG, Toxoplasma gondii VEG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.