STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_10610Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
IF1G_05271
LUC7 protein.
   
 0.958
IF1G_09972
DNA binding protein SART-1.
   
 
 0.919
IF1G_04070
Pre-mRNA-processing ATP-dependent RNA helicase PRP5.
   
 0.908
IF1G_02099
U1 small nuclear ribonucleoprotein.
   
 
 0.905
IF1G_01625
Formin binding protein (FNB3).
   
 
 0.895
IF1G_09171
Glutamic acid rich protein.
   
 0.883
IF1G_04493
PWI domain mRNA processing protein.
   
 0.883
IF1G_09243
Cap binding protein.
   
 
 0.870
IF1G_04784
U2 small nuclear ribonucleoprotein A.
   
 
 0.869
IF1G_01999
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.855
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.