STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_10565Transcription factor SPT8. (660 aa)    
Predicted Functional Partners:
IF1G_03076
Transcriptional activator spt7.
    
 
 0.978
IF1G_00209
cAMP-dependent protein kinase regulatory subunit.
    
 
 0.935
IF1G_10155
TAF6-like protein.
    
 
 0.928
IF1G_10222
Transcription initiation factor TFIID subunit.
    
 
 0.920
IF1G_08416
FAT domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.916
IF1G_09734
SAGA complex subunit Spt20.
    
 
 0.909
IF1G_08714
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.899
IF1G_09287
Transcription initiation factor TFIID subunit 12.
    
 
 0.889
IF1G_02797
SAGA-like transcriptional regulatory complex subunit Spt3.
    
 
 0.889
IF1G_04861
Histone acetyltransferase subunit 3-like protein.
    
 
 0.875
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.