STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_10406Ribosomal protein L34. (136 aa)    
Predicted Functional Partners:
IF1G_09453
Ribosomal protein L13.
   
 
 0.992
IF1G_02098
Mitochondrial ribosomal protein L43.
   
 
 0.991
IF1G_06221
Ribosomal protein S15.
   
 
 0.990
IF1G_01802
50S ribosomal subunit L30.
   
 
 0.989
IF1G_00623
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.986
IF1G_09802
Mitochondrial 54S ribosomal protein YmL9.
   
 
 0.985
IF1G_00693
Mitochondrial ribosomal protein L23.
   
 
 0.985
IF1G_07629
Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.985
IF1G_07274
50S ribosomal subunit protein L15.
   
   0.984
IF1G_03923
50S ribosomal protein YmL27.
   
 
 0.984
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.