STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_10321Nuclear pore complex component. (283 aa)    
Predicted Functional Partners:
IF1G_04593
Nucleoporin Nsp1.
    
 
 0.797
IF1G_09122
Ubiquitin C-terminal hydrolase; Belongs to the peptidase C19 family.
    
 
 0.650
IF1G_06769
Nuclear envelope protein.
    
 
 0.646
IF1G_08111
RNA export mediator Gle1.
  
 
 0.629
IF1G_00321
Nucleoporin.
    
 
 0.603
IF1G_08099
High-temperature-induced dauer-formation protein-like protein.
 
      0.588
IF1G_02347
Nuclear envelope pore membrane protein.
    
 
 0.562
IF1G_01982
Uncharacterized protein.
  
 
 
 0.559
IF1G_06595
Curved DNA-binding protein (42 kDa protein).
    
   0.525
IF1G_04417
mRNA export factor mex67.
    
 
 0.509
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.