Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IF1G_01122 | IF1G_01507 | A0A545VHK0 | A0A545WAL4 | DNA repair protein RAD1. | DNA polymerase. | 0.674 |
IF1G_01122 | IF1G_05641 | A0A545VHK0 | A0A545V293 | DNA repair protein RAD1. | DNA repair protein Mus81. | 0.965 |
IF1G_01122 | IF1G_09927 | A0A545VHK0 | A0A545UPN1 | DNA repair protein RAD1. | Yap-binding protein. | 0.589 |
IF1G_01497 | IF1G_01507 | A0A545VC09 | A0A545WAL4 | DNA polymerase subunit delta-2. | DNA polymerase. | 0.999 |
IF1G_01497 | IF1G_09927 | A0A545VC09 | A0A545UPN1 | DNA polymerase subunit delta-2. | Yap-binding protein. | 0.647 |
IF1G_01507 | IF1G_01122 | A0A545WAL4 | A0A545VHK0 | DNA polymerase. | DNA repair protein RAD1. | 0.674 |
IF1G_01507 | IF1G_01497 | A0A545WAL4 | A0A545VC09 | DNA polymerase. | DNA polymerase subunit delta-2. | 0.999 |
IF1G_01507 | IF1G_05641 | A0A545WAL4 | A0A545V293 | DNA polymerase. | DNA repair protein Mus81. | 0.776 |
IF1G_01507 | IF1G_07788 | A0A545WAL4 | A0A545VUQ4 | DNA polymerase. | Essential protein Yae1. | 0.489 |
IF1G_01507 | IF1G_09927 | A0A545WAL4 | A0A545UPN1 | DNA polymerase. | Yap-binding protein. | 0.636 |
IF1G_01507 | IF1G_10872 | A0A545WAL4 | A0A545ULR4 | DNA polymerase. | Ankyrin repeat protein. | 0.489 |
IF1G_02203 | IF1G_06630 | A0A545VE48 | A0A545VXP5 | SMN family protein Smn1. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.968 |
IF1G_02203 | IF1G_09927 | A0A545VE48 | A0A545UPN1 | SMN family protein Smn1. | Yap-binding protein. | 0.638 |
IF1G_03931 | IF1G_09927 | A0A545V8Z1 | A0A545UPN1 | BZIP transcription factor (AP-1). | Yap-binding protein. | 0.593 |
IF1G_05641 | IF1G_01122 | A0A545V293 | A0A545VHK0 | DNA repair protein Mus81. | DNA repair protein RAD1. | 0.965 |
IF1G_05641 | IF1G_01507 | A0A545V293 | A0A545WAL4 | DNA repair protein Mus81. | DNA polymerase. | 0.776 |
IF1G_05641 | IF1G_09927 | A0A545V293 | A0A545UPN1 | DNA repair protein Mus81. | Yap-binding protein. | 0.647 |
IF1G_06630 | IF1G_02203 | A0A545VXP5 | A0A545VE48 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | SMN family protein Smn1. | 0.968 |
IF1G_06630 | IF1G_09927 | A0A545VXP5 | A0A545UPN1 | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | Yap-binding protein. | 0.608 |
IF1G_07788 | IF1G_01507 | A0A545VUQ4 | A0A545WAL4 | Essential protein Yae1. | DNA polymerase. | 0.489 |
page 1 of 2