STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_09940Dihydroorotate reductase PyrE. (1233 aa)    
Predicted Functional Partners:
IF1G_02926
Got1 family protein.
  
 
 0.992
IF1G_03667
Orotidine 5'-phosphate decarboxylase.
  
 0.970
IF1G_02846
Orotate phosphoribosyltransferase.
  
 0.967
IF1G_03668
Fungal transcriptional regulatory protein.
  
 0.958
IF1G_05524
Carbamoyl-phosphate synthase, mitochondrial.
  
 0.954
IF1G_04669
Carbamoyl-phosphate synthase, mitochondrial.
  
 0.954
IF1G_07988
Amidohydrolase domain-containing protein.
  
 0.952
IF1G_08224
Allantoinase.
  
 0.952
IF1G_05373
Amidohydrolase.
  
 0.952
IF1G_05207
NADPH:adrenodoxin oxidoreductase, mitochondrial.
  
 0.952
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.