STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_09277Extracellular dioxygenase. (423 aa)    
Predicted Functional Partners:
IF1G_02897
TOR signaling pathway regulator (TapA).
    
 0.632
IF1G_03909
Electron transfer protein 1, mitochondrial.
    
 0.492
IF1G_04503
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 
 0.476
IF1G_03796
Serine/threonine-protein phosphatase.
   
 
 0.460
IF1G_08484
1,4-alpha-glucan branching enzyme.
   
 
  0.427
IF1G_03781
3-oxoacyl-(Acyl-carrier-protein) reductase.
 
  
   0.427
IF1G_01886
ATP synthase subunit gamma.
   
   0.426
IF1G_02951
Serine/threonine-protein phosphatase.
    
 
 0.409
IF1G_00427
Serine/threonine-protein phosphatase.
    
 
 0.409
IF1G_07893
Ser/Thr protein phosphatase family.
    
 
 0.405
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.