STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_08918Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (479 aa)    
Predicted Functional Partners:
IF1G_08879
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.947
IF1G_01343
Seryl-tRNA synthetase.
  
 
 0.801
IF1G_00320
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
  
 0.781
IF1G_02195
Seryl-tRNA synthetase.
  
 
 0.763
IF1G_04837
Arginyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.704
IF1G_08510
Phenylalanyl-tRNA synthetase beta chain.
  
  
 0.703
IF1G_00563
Tyrosine--tRNA ligase.
  
  
 0.700
IF1G_06022
Leucyl-tRNA synthetase.
  
 
 0.698
IF1G_01436
Leucyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.685
IF1G_04599
Valyl-tRNA synthetase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.659
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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