STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_08490Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1. (451 aa)    
Predicted Functional Partners:
IF1G_04970
Translation Initiation Factor Eif4e; Belongs to the eukaryotic initiation factor 4E family.
   
 0.788
IF1G_03283
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
0.771
IF1G_00233
RNP domain-containing protein.
    
  0.761
IF1G_09898
Nuclear cap-binding protein subunit 2.
    
 0.694
IF1G_09243
Cap binding protein.
    
 0.685
IF1G_02068
Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family.
   
 0.685
IF1G_00687
Eukaryotic translation initiation factor 2 alpha subunit.
   
 0.662
IF1G_04308
Polysaccharide export protein.
   
 0.661
IF1G_01730
Polysaccharide export protein.
   
 0.661
IF1G_08496
Eukaryotic translation initiation factor subunit eIF-4F.
   
 0.661
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.