Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_08672ATP-dependent RNA helicase DHX8. (1189 aa)    
Predicted Functional Partners:
IF1G_04194
mRNA splicing factor.
   
 0.977
IF1G_07111
Potassium channel regulatory factor.
    
 0.976
IF1G_01090
Pre-mRNA-splicing factor slu7.
    
 0.976
IF1G_08372
ATP-dependent RNA helicase SUB2.
    
 0.972
IF1G_01781
SYF2 splicing factor.
    
 0.971
IF1G_02150
Cell cycle control protein (Cwf22).
   
 0.970
IF1G_08347
Pre-mRNA splicing factor syf-1.
   
 0.966
IF1G_05768
Pre-mRNA splicing factor CLF1.
   
 0.955
IF1G_02989
Pre-mRNA-processing protein 45.
    
 0.953
IF1G_06054
Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43.
   
 0.952
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.