STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_08446Metalloprotease MEP1-like protein. (303 aa)    
Predicted Functional Partners:
IF1G_04593
Nucleoporin Nsp1.
    
 0.738
IF1G_08111
RNA export mediator Gle1.
    
 0.717
IF1G_00598
Elongation factor 3.
    
   0.706
IF1G_04011
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.699
IF1G_06974
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.631
IF1G_05624
Ubiquitin family domain-containing protein.
   
  0.606
IF1G_07808
Ribosomal protein s28e domain-containing protein.
   
   0.602
IF1G_01946
Ribosomal protein S15, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS19 family.
   
   0.599
IF1G_10626
mRNA-nucleus export ATPase (Elf1).
    
   0.598
IF1G_07103
40S ribosomal protein S14 (CRP2); Belongs to the universal ribosomal protein uS11 family.
   
 
 0.583
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.