IF1G_05297 protein (Cordyceps javanica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

IF1G_05297

Uncharacterized protein. (497 aa)

Predicted Functional Partners:

IF1G_05053

0.679

IF1G_01828

0.591

IF1G_04436

0.584

IF1G_05167

0.581

IF1G_08640

0.575

IF1G_04531

0.575

IF1G_08981

0.575

IF1G_10310

0.555

IF1G_08877

0.555

IF1G_01379

0.524

Your Current Organism:

Cordyceps javanica

NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
IF1G_01379	IF1G_01828	A0A545VBS1	A0A545W9N6	RING finger protein.	Misfolded glycoproteins degradation protein Yos9.	0.994
IF1G_01379	IF1G_05297	A0A545VBS1	A0A545V166	RING finger protein.	Uncharacterized protein.	0.524
IF1G_01379	IF1G_08877	A0A545VBS1	A0A545VRN5	RING finger protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.996
IF1G_01379	IF1G_10310	A0A545VBS1	A0A545UNN2	RING finger protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.996
IF1G_01828	IF1G_01379	A0A545W9N6	A0A545VBS1	Misfolded glycoproteins degradation protein Yos9.	RING finger protein.	0.994
IF1G_01828	IF1G_05297	A0A545W9N6	A0A545V166	Misfolded glycoproteins degradation protein Yos9.	Uncharacterized protein.	0.591
IF1G_01828	IF1G_08877	A0A545W9N6	A0A545VRN5	Misfolded glycoproteins degradation protein Yos9.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.993
IF1G_01828	IF1G_10310	A0A545W9N6	A0A545UNN2	Misfolded glycoproteins degradation protein Yos9.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.988
IF1G_04436	IF1G_04531	A0A545W3B3	A0A545V6F3	G-protein coupled receptor.	Chitooligosaccharide deacetylase.	0.542
IF1G_04436	IF1G_05297	A0A545W3B3	A0A545V166	G-protein coupled receptor.	Uncharacterized protein.	0.584
IF1G_04436	IF1G_08640	A0A545W3B3	A0A545UTC8	G-protein coupled receptor.	Chitin deacetylase.	0.542
IF1G_04436	IF1G_08981	A0A545W3B3	A0A545VRH0	G-protein coupled receptor.	Chitin deacetylase.	0.542
IF1G_04531	IF1G_04436	A0A545V6F3	A0A545W3B3	Chitooligosaccharide deacetylase.	G-protein coupled receptor.	0.542
IF1G_04531	IF1G_05297	A0A545V6F3	A0A545V166	Chitooligosaccharide deacetylase.	Uncharacterized protein.	0.575
IF1G_04531	IF1G_08981	A0A545V6F3	A0A545VRH0	Chitooligosaccharide deacetylase.	Chitin deacetylase.	0.400
IF1G_05053	IF1G_05297	A0A545V431	A0A545V166	Glycerol:H+ symporter (Gup1); Belongs to the membrane-bound acyltransferase family.	Uncharacterized protein.	0.679
IF1G_05167	IF1G_05297	A0A545V4F5	A0A545V166	Vps52 / Sac2 family protein.	Uncharacterized protein.	0.581
IF1G_05297	IF1G_01379	A0A545V166	A0A545VBS1	Uncharacterized protein.	RING finger protein.	0.524
IF1G_05297	IF1G_01828	A0A545V166	A0A545W9N6	Uncharacterized protein.	Misfolded glycoproteins degradation protein Yos9.	0.591
IF1G_05297	IF1G_04436	A0A545V166	A0A545W3B3	Uncharacterized protein.	G-protein coupled receptor.	0.584

page 1 of 2

Server load: low (14%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About