STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_04702ER membrane protein complex subunit 4; Belongs to the EMC4 family. (182 aa)    
Predicted Functional Partners:
IF1G_00354
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
   
 
 0.994
IF1G_01311
Tetratricopeptide repeat domain-containing protein.
   
 
 0.992
IF1G_03802
DUF1620 domain-containing protein.
    
 
 0.990
IF1G_09781
UPF0480 protein.
   
 
 0.968
IF1G_04964
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
   0.931
IF1G_05445
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.931
IF1G_06486
Dynactin Arp1 p62 subunit.
    
 
 0.920
IF1G_05850
Transmembrane protein 32.
   
 
 0.907
IF1G_06487
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
 
 0.512
IF1G_06298
Protein transport protein SEC61 alpha subunit.
    
 
 0.491
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.