Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
IF1G_03669CCCH zinc finger DNA binding protein. (498 aa)    
Predicted Functional Partners:
IF1G_02386
Signal recognition particle 14kD protein domain-containing protein.
   
 0.954
IF1G_02838
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
   
 0.936
IF1G_01365
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
   
 0.936
IF1G_03648
Signal recognition particle 54 kDa protein.
   
 0.934
IF1G_03668
Fungal transcriptional regulatory protein.
 
    
 0.678
IF1G_08978
Signal recognition particle receptor beta subunit.
   
 
 0.596
IF1G_10626
mRNA-nucleus export ATPase (Elf1).
    
   0.559
IF1G_07984
Signal sequence receptor alpha subunit.
   
 
 0.554
IF1G_07985
Signal sequence receptor alpha subunit.
   
 
 0.554
IF1G_04113
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
  0.540
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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