STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_03903RING and UBP finger domain-containing protein. (637 aa)    
Predicted Functional Partners:
IF1G_03902
Ubiquitin.
 
  
  0.911
IF1G_08239
Ubiquitin.
 
  
  0.883
IF1G_05170
Ubiquitin family domain-containing protein.
 
  
  0.869
IF1G_11146
Ubiquitin.
    
  0.725
IF1G_09032
Ubiquitin family domain-containing protein.
    
  0.725
IF1G_01611
Ubiquitin.
    
  0.725
IF1G_05896
Sequence-specific DNA binding protein.
    
  0.716
IF1G_00126
Ras-like protein.
    
  0.677
IF1G_10986
Ras-2 protein.
    
  0.677
IF1G_00924
RAS small monomeric GTPase.
    
  0.677
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.