STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_02375Uroporphyrinogen-III synthase HemD. (303 aa)    
Predicted Functional Partners:
IF1G_09355
Hydroxymethylbilane synthase.
  
 0.991
IF1G_00619
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
 0.983
IF1G_09349
Uncharacterized protein.
  
 0.970
IF1G_00587
Siroheme synthase.
  
 
 0.959
IF1G_05841
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.958
IF1G_03239
NAD(P)-binding domain.
  
 
 0.902
IF1G_02413
NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial.
 
 
    0.897
IF1G_05748
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.788
IF1G_08275
Sulfite reductase beta subunit.
    
 0.727
IF1G_09865
Coproporphyrinogen III oxidase.
     
 0.581
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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