Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IF1G_00779 | IF1G_02346 | A0A545VGJ3 | A0A545V958 | Bystin. | U3 small nucleolar RNA-associated protein 22. | 0.997 |
IF1G_00779 | IF1G_02387 | A0A545VGJ3 | A0A545V9A6 | Bystin. | Armadillo-type fold domain-containing protein. | 0.790 |
IF1G_00779 | IF1G_02403 | A0A545VGJ3 | A0A545V9D0 | Bystin. | R3H domain-containing protein. | 0.932 |
IF1G_00779 | IF1G_04484 | A0A545VGJ3 | A0A545V6B3 | Bystin. | G-patch domain-containing protein. | 0.963 |
IF1G_00779 | IF1G_05844 | A0A545VGJ3 | A0A545V2S1 | Bystin. | ATP-dependent RNA helicase (Hrh1). | 0.987 |
IF1G_00779 | IF1G_05998 | A0A545VGJ3 | A0A545UZX0 | Bystin. | U3 small nucleolar ribonucleoprotein IMP3. | 0.998 |
IF1G_00779 | IF1G_06054 | A0A545VGJ3 | A0A545V047 | Bystin. | Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43. | 0.946 |
IF1G_00779 | IF1G_08696 | A0A545VGJ3 | A0A545UTI0 | Bystin. | RNA helicase. | 0.936 |
IF1G_00779 | IF1G_09666 | A0A545VGJ3 | A0A545UQ64 | Bystin. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.998 |
IF1G_00779 | IF1G_10731 | A0A545VGJ3 | A0A545VJW3 | Bystin. | RNA helicase. | 0.977 |
IF1G_02346 | IF1G_00779 | A0A545V958 | A0A545VGJ3 | U3 small nucleolar RNA-associated protein 22. | Bystin. | 0.997 |
IF1G_02346 | IF1G_02403 | A0A545V958 | A0A545V9D0 | U3 small nucleolar RNA-associated protein 22. | R3H domain-containing protein. | 0.934 |
IF1G_02346 | IF1G_04484 | A0A545V958 | A0A545V6B3 | U3 small nucleolar RNA-associated protein 22. | G-patch domain-containing protein. | 0.520 |
IF1G_02346 | IF1G_05844 | A0A545V958 | A0A545V2S1 | U3 small nucleolar RNA-associated protein 22. | ATP-dependent RNA helicase (Hrh1). | 0.984 |
IF1G_02346 | IF1G_05998 | A0A545V958 | A0A545UZX0 | U3 small nucleolar RNA-associated protein 22. | U3 small nucleolar ribonucleoprotein IMP3. | 0.993 |
IF1G_02346 | IF1G_06054 | A0A545V958 | A0A545V047 | U3 small nucleolar RNA-associated protein 22. | Pre-mRNA splicing factor ATP-dependent RNA helicase PRP43. | 0.931 |
IF1G_02346 | IF1G_08696 | A0A545V958 | A0A545UTI0 | U3 small nucleolar RNA-associated protein 22. | RNA helicase. | 0.977 |
IF1G_02346 | IF1G_09666 | A0A545V958 | A0A545UQ64 | U3 small nucleolar RNA-associated protein 22. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.997 |
IF1G_02346 | IF1G_10731 | A0A545V958 | A0A545VJW3 | U3 small nucleolar RNA-associated protein 22. | RNA helicase. | 0.821 |
IF1G_02387 | IF1G_00779 | A0A545V9A6 | A0A545VGJ3 | Armadillo-type fold domain-containing protein. | Bystin. | 0.790 |
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