STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_02369Karyopherin. (1224 aa)    
Predicted Functional Partners:
IF1G_04495
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.994
IF1G_04593
Nucleoporin Nsp1.
    
 0.963
IF1G_01982
Uncharacterized protein.
    
 0.962
IF1G_03451
Nucleoporin SONB.
  
 0.804
IF1G_02751
WD-repeat containing protein slp1.
   
  0.752
IF1G_00947
Uncharacterized protein.
    
 0.750
IF1G_10646
Nucleoporin NUP49/NSP49.
    
 0.750
IF1G_03237
Swi6.
    
 
 0.711
IF1G_04417
mRNA export factor mex67.
    
 
 0.706
IF1G_02026
NUDIX domain-containing protein.
    
 0.702
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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