Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| IF1G_01281 | IF1G_02651 | A0A545WBF7 | A0A545VA10 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.997 |
| IF1G_01281 | IF1G_03079 | A0A545WBF7 | A0A545VBM6 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Arginine/serine-rich splicing factor. | 0.683 |
| IF1G_01281 | IF1G_07860 | A0A545WBF7 | A0A545UUZ8 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | tRNA-splicing endonuclease. | 0.551 |
| IF1G_01281 | IF1G_09243 | A0A545WBF7 | A0A545VQV8 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Cap binding protein. | 0.764 |
| IF1G_01281 | IF1G_09898 | A0A545WBF7 | A0A545VNB2 | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | Nuclear cap-binding protein subunit 2. | 0.887 |
| IF1G_02651 | IF1G_01281 | A0A545VA10 | A0A545WBF7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.997 |
| IF1G_02651 | IF1G_03079 | A0A545VA10 | A0A545VBM6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Arginine/serine-rich splicing factor. | 0.773 |
| IF1G_02651 | IF1G_03283 | A0A545VA10 | A0A545W5K0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.481 |
| IF1G_02651 | IF1G_07860 | A0A545VA10 | A0A545UUZ8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | tRNA-splicing endonuclease. | 0.905 |
| IF1G_02651 | IF1G_09243 | A0A545VA10 | A0A545VQV8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Cap binding protein. | 0.786 |
| IF1G_02651 | IF1G_09898 | A0A545VA10 | A0A545VNB2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Nuclear cap-binding protein subunit 2. | 0.793 |
| IF1G_02651 | IF1G_10012 | A0A545VA10 | A0A545UPZ0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA binding protein Nrd1. | 0.862 |
| IF1G_02651 | IF1G_11176 | A0A545VA10 | A0A545UL46 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | CID domain-containing protein. | 0.862 |
| IF1G_02651 | IF1G_11330 | A0A545VA10 | A0A545UKL4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | CID domain-containing protein. | 0.862 |
| IF1G_03079 | IF1G_01281 | A0A545VBM6 | A0A545WBF7 | Arginine/serine-rich splicing factor. | Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene. | 0.683 |
| IF1G_03079 | IF1G_02651 | A0A545VBM6 | A0A545VA10 | Arginine/serine-rich splicing factor. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.773 |
| IF1G_03079 | IF1G_03283 | A0A545VBM6 | A0A545W5K0 | Arginine/serine-rich splicing factor. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.684 |
| IF1G_03079 | IF1G_07190 | A0A545VBM6 | A0A545VWU6 | Arginine/serine-rich splicing factor. | ATP-dependent RNA helicase DOB1. | 0.748 |
| IF1G_03079 | IF1G_07860 | A0A545VBM6 | A0A545UUZ8 | Arginine/serine-rich splicing factor. | tRNA-splicing endonuclease. | 0.854 |
| IF1G_03079 | IF1G_09243 | A0A545VBM6 | A0A545VQV8 | Arginine/serine-rich splicing factor. | Cap binding protein. | 0.882 |
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