STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_01339D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (473 aa)    
Predicted Functional Partners:
IF1G_10243
Phosphoserine aminotransferase.
 
 0.990
IF1G_08497
Tryptophan synthase.
  
 0.960
IF1G_04135
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.908
IF1G_02963
Uridine/cytidine kinase.
     
 0.907
IF1G_06058
Alanine--glyoxylate aminotransferase.
  
 
 0.779
IF1G_00594
Phosphoserine phosphatase.
  
 0.743
IF1G_06849
Cytochrome b2.
    
 0.738
IF1G_04065
Mitochondrial cytochrome b2.
    
 0.738
IF1G_05151
Cytochrome b2, mitochondrial; Belongs to the cytochrome b5 family.
    
 0.738
IF1G_03372
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.736
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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