STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_00090Vacuolar morphogenesis protein AvaB. (1071 aa)    
Predicted Functional Partners:
IF1G_00097
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
   
 0.998
IF1G_07167
Vacuolar protein sorting protein (VPS11).
  
 0.997
IF1G_01884
Vacuolar sorting protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.997
IF1G_09876
Vacuolar protein sorting protein DigA.
   
 0.997
IF1G_04122
Vacuolar assembly protein.
   
 0.997
IF1G_10330
Ras-related protein Rab7.
    
 
 0.966
IF1G_05964
Vacuolar fusion protein CCZ1.
    
 
 0.964
IF1G_01383
TGF beta receptor associated protein 1.
    
 
0.963
IF1G_02929
SNARE protein; Belongs to the synaptobrevin family.
    
 
 0.961
IF1G_02701
Golgi complex component (Vps8).
   
 
 0.937
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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