STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_00234E3 ubiquitin-protein ligase. (816 aa)    
Predicted Functional Partners:
IF1G_03902
Ubiquitin.
    
 0.971
IF1G_00672
AN1-like zinc finger domain-containing protein.
    
 0.949
IF1G_09718
TRAF-like signal transducer.
    
 0.935
IF1G_00963
Histone-fold domain-containing protein.
    
 0.928
IF1G_06628
Arrestin (Or S-antigen) domain-containing protein.
    
 
 0.917
IF1G_05629
26S proteasome regulatory subunit S5A, multiubiquitin chain binding protein.
    
 0.914
IF1G_05896
Sequence-specific DNA binding protein.
    
 0.909
IF1G_08239
Ubiquitin.
    
 0.909
IF1G_00060
Mating-type alpha-pheromone receptor PreB.
     
 0.909
IF1G_02651
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.876
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.