STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_003874-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (492 aa)    
Predicted Functional Partners:
IF1G_04391
Methylmalonate-semialdehyde dehydrogenase, mitochondrial.
   
 
 0.955
IF1G_09721
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.953
IF1G_02732
Succinate-semialdehyde dehydrogenase.
  
 0.947
IF1G_10694
Succinate-semialdehyde dehydrogenase.
  
 0.934
IF1G_04336
Glutamate decarboxylase.
  
 0.931
IF1G_08596
Glutamate decarboxylase.
  
 0.931
IF1G_06273
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.923
IF1G_03766
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.923
IF1G_02512
Retinal dehydrogenase 2; Belongs to the aldehyde dehydrogenase family.
  
 0.923
IF1G_10620
Pantoate-beta-alanine ligase.
     
 0.901
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.