STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_01017Epoxidase subunit A. (270 aa)    
Predicted Functional Partners:
IF1G_01016
Metal dependent phosphohydrolase.
  
  0.983
IF1G_02817
Peroxisomal targeting signal 2 receptor.
    
 0.846
IF1G_00751
Cupin domain-containing protein.
    
 0.809
IF1G_05575
Peroxisomal targeting signal receptor.
    
 0.742
IF1G_08177
Phytanoyl-CoA dioxygenase.
   
 
 0.731
IF1G_06058
Alanine--glyoxylate aminotransferase.
    
 0.710
IF1G_02760
Peroxisomal membrane protein (Pex13).
     
 0.696
IF1G_02027
RING-1 protein.
   
 
 0.687
IF1G_10512
Viral A-type inclusion protein repeat protein.
    
 0.662
IF1G_05949
Peroxisomal membrane anchor protein Pex14.
    
 0.662
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.