STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_11218ABC multidrug transporter. (1223 aa)    
Predicted Functional Partners:
IF1G_04262
Sulfite oxidase.
     
  0.496
IF1G_10310
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.451
IF1G_10178
Ubiquitin carboxyl-terminal hydrolase.
    
  0.448
IF1G_08877
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.435
IF1G_09238
Ubiquitin C-terminal hydrolase family protein.
    
  0.424
IF1G_04780
ATP-dependent Zn protease.
    
  0.420
IF1G_00301
Cell division cycle protein 48; Belongs to the AAA ATPase family.
    
  0.420
IF1G_00678
AAA family ATPase.
    
  0.420
IF1G_00526
Aimless RasGEF.
    
  0.405
IF1G_08590
Histone deacetylase HosB.
    
  0.403
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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