STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_10792CobW domain-containing protein. (635 aa)    
Predicted Functional Partners:
IF1G_09868
50S ribosomal protein L24.
  
  
 0.648
IF1G_01514
Ribosomal protein s14p/S29e domain-containing protein.
  
 
 0.636
IF1G_03816
Mitochondrial 40S ribosomal protein MRP2.
  
 
 0.627
IF1G_04195
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.557
IF1G_03984
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.557
IF1G_05437
Cysteinyl-tRNA synthetase.
  
  
 0.421
IF1G_10980
Fungal zn(2)-Cys(6) binuclear clusterdomain-containing protein.
    
   0.400
IF1G_03524
Fungal zn(2)-Cys(6) binuclear clusterdomain-containing protein.
    
   0.400
IF1G_04051
Zn(II)2Cys6 transcription factor.
    
   0.400
IF1G_03530
Uncharacterized protein.
    
   0.400
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.