STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_10257Checkpoint protein; Belongs to the HUS1 family. (384 aa)    
Predicted Functional Partners:
IF1G_09399
DNA repair protein rad9; Acts in DNA repair and mutagenesis. Involved in promoting resistance to ionizing radiation and UV light, as well as regulating cell cycle progression after irradiation.
  
 
 0.999
IF1G_04978
DNA repair protein Rad1.
    
 0.999
IF1G_08385
3'-5' exonuclease/helicase (Wrn).
    
 0.993
IF1G_02537
Cell cycle checkpoint protein RAD17.
   
 0.989
IF1G_05534
DNA replication factor C subunit Rfc2.
   
 0.986
IF1G_10312
Activator 1 37 kDa subunit.
    
 0.984
IF1G_00785
Activator 1 38 kDa subunit.
    
 0.983
IF1G_06002
Activator 1 subunit 3.
   
 0.977
IF1G_07875
Phosphatidylinositol 3-and 4-kinase; Belongs to the PI3/PI4-kinase family.
   
 0.928
IF1G_10969
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.906
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.