STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_084643-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (782 aa)    
Predicted Functional Partners:
IF1G_08924
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 
 0.985
IF1G_10882
3-isopropylmalate dehydrogenase; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
 0.978
IF1G_04185
Homocitrate synthase, mitochondrial; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 
 0.943
IF1G_09981
Acetolactate synthase small subunit.
  
  
 0.932
IF1G_10983
Ketol-acid reductoisomerase, mitochondrial; Belongs to the ketol-acid reductoisomerase family.
 
 
  
 0.927
IF1G_11252
Shikimate kinase domain-containing protein.
  
 
 0.898
IF1G_05198
Uncharacterized protein.
  
 
 0.898
IF1G_09343
Uncharacterized protein.
  
 
 0.898
IF1G_03618
Uncharacterized protein.
  
 
 0.898
IF1G_03740
Hydroxymethylglutaryl-CoA lyase.
  
 
 0.890
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.