STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_08066MYB DNA-binding domain-containing protein. (515 aa)    
Predicted Functional Partners:
IF1G_08584
40S ribosomal protein S17.
   
 0.994
IF1G_03746
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.994
IF1G_02586
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
  
 0.994
IF1G_01946
Ribosomal protein S15, eukaryotic/archaeal; Belongs to the universal ribosomal protein uS19 family.
  
 0.994
IF1G_08512
Cytoplasmic ribosomal protein subunit S3.
  
 0.994
IF1G_00672
AN1-like zinc finger domain-containing protein.
   
 0.994
IF1G_06487
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.993
IF1G_10626
mRNA-nucleus export ATPase (Elf1).
   
   0.993
IF1G_09857
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.993
IF1G_09438
Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.993
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.