STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_07939Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial. (576 aa)    
Predicted Functional Partners:
IF1G_07887
3-methylcrotonyl-CoA carboxylase subunit alpha.
 
 0.999
IF1G_10519
Urea amidolyase.
 
 0.997
IF1G_07312
Urea amidolyase.
 
 0.997
IF1G_03601
Biotin apo-protein ligase.
  
 
 0.988
IF1G_07940
Isovaleryl-CoA dehydrogenase, mitochondrial.
 
 0.987
IF1G_02039
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.986
IF1G_05980
4-hydroxyphenylpyruvate dioxygenase.
  
 
 0.972
IF1G_09293
Methylglutaconyl-CoA hydratase.
  
 
 0.940
IF1G_01724
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.936
IF1G_07056
Enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.932
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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