STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_05916Patched sphingolipid transporter (Ncr1). (1271 aa)    
Predicted Functional Partners:
IF1G_03274
Sterol regulatory element binding protein Sre1.
   
 0.927
IF1G_03154
Membrane-tethered transcription factor (Predicted).
    
 0.919
IF1G_08560
INSIG domain-containing protein.
   
 0.690
IF1G_03019
Chromatin assembly factor 1 subunit A.
    
 0.689
IF1G_05927
Ser/Thr protein phosphatase.
 
      0.657
IF1G_01911
Oxysterol binding protein (Osh7); Belongs to the OSBP family.
   
 0.595
IF1G_07597
Oxysterol binding protein; Belongs to the OSBP family.
   
 0.577
IF1G_04442
Uncharacterized protein.
   
 0.577
IF1G_09904
Uncharacterized protein.
   
 0.577
IF1G_04344
Oxysterol-binding protein; Belongs to the OSBP family.
   
 0.577
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.