Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
IF1G_04113 | IF1G_05001 | A0A545W2B6 | A0A545V3X7 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | Cytochrome b5. | 0.474 |
IF1G_04113 | IF1G_05160 | A0A545W2B6 | A0A545W1J1 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | Nitrate reductase. | 0.485 |
IF1G_04113 | IF1G_06320 | A0A545W2B6 | A0A545V0V8 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | MSP domain-containing protein. | 0.759 |
IF1G_04113 | IF1G_06661 | A0A545W2B6 | A0A545VXT1 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | Oligopeptide transporter. | 0.479 |
IF1G_04113 | IF1G_07542 | A0A545W2B6 | A0A545VSC6 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | Hsc70 cochaperone (SGT). | 0.864 |
IF1G_04113 | IF1G_09424 | A0A545W2B6 | A0A545UQV0 | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | TPR domain-containing protein. | 0.766 |
IF1G_04262 | IF1G_05001 | A0A545W2X5 | A0A545V3X7 | Sulfite oxidase. | Cytochrome b5. | 0.878 |
IF1G_04262 | IF1G_05160 | A0A545W2X5 | A0A545W1J1 | Sulfite oxidase. | Nitrate reductase. | 0.956 |
IF1G_04262 | IF1G_06588 | A0A545W2X5 | A0A545UYR2 | Sulfite oxidase. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.831 |
IF1G_04262 | IF1G_06661 | A0A545W2X5 | A0A545VXT1 | Sulfite oxidase. | Oligopeptide transporter. | 0.510 |
IF1G_04262 | IF1G_09511 | A0A545W2X5 | A0A545UR40 | Sulfite oxidase. | Cytochrome b5 reductase. | 0.539 |
IF1G_04262 | IF1G_10266 | A0A545W2X5 | A0A545UNK9 | Sulfite oxidase. | Mitochondrial translation optimization protein (Mto1). | 0.441 |
IF1G_05001 | IF1G_04113 | A0A545V3X7 | A0A545W2B6 | Cytochrome b5. | Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. | 0.474 |
IF1G_05001 | IF1G_04262 | A0A545V3X7 | A0A545W2X5 | Cytochrome b5. | Sulfite oxidase. | 0.878 |
IF1G_05001 | IF1G_05160 | A0A545V3X7 | A0A545W1J1 | Cytochrome b5. | Nitrate reductase. | 0.975 |
IF1G_05001 | IF1G_06320 | A0A545V3X7 | A0A545V0V8 | Cytochrome b5. | MSP domain-containing protein. | 0.447 |
IF1G_05001 | IF1G_06588 | A0A545V3X7 | A0A545UYR2 | Cytochrome b5. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.487 |
IF1G_05001 | IF1G_06661 | A0A545V3X7 | A0A545VXT1 | Cytochrome b5. | Oligopeptide transporter. | 0.573 |
IF1G_05001 | IF1G_09511 | A0A545V3X7 | A0A545UR40 | Cytochrome b5. | Cytochrome b5 reductase. | 0.487 |
IF1G_05001 | IF1G_10266 | A0A545V3X7 | A0A545UNK9 | Cytochrome b5. | Mitochondrial translation optimization protein (Mto1). | 0.487 |
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