STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_05732Shwachman-Bodian-Diamond syndrome protein. (114 aa)    
Predicted Functional Partners:
IF1G_02981
ATP synthase F0.
   
    0.517
IF1G_10154
ThiJ/PfpI family protein.
   
  
 0.515
IF1G_07631
Phosphatidyl synthase.
   
    0.472
IF1G_02986
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
   
    0.463
IF1G_09953
Glutathione transferase (Gto1); Belongs to the GST superfamily.
   
    0.432
IF1G_04331
AMME syndrome protein.
   
    0.430
IF1G_09721
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
    0.429
IF1G_08787
Cupin 2 conserved barrel domain-containing protein.
   
    0.426
IF1G_01613
Protease inhibitor (Tfs1).
   
    0.426
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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