STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_02350DNA double-strand break repair rad50 ATPase. (1334 aa)    
Predicted Functional Partners:
IF1G_05735
Serine/threonine-protein kinase plo1.
   
 0.793
IF1G_03563
G domain-containing protein.
    
 0.729
IF1G_05854
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.699
IF1G_09915
Separin.
    
 0.695
IF1G_09233
Ankyrin repeat protein.
    
 0.694
IF1G_10872
Ankyrin repeat protein.
    
 0.649
IF1G_07788
Essential protein Yae1.
    
 0.649
IF1G_02914
Serine/threonine-protein phosphatase.
    
  0.628
IF1G_06081
Spindle pole body component.
   
 
 0.620
IF1G_07889
Myosin type II heavy chain; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.614
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.