STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IF1G_00727RTA1 domain-containing protein. (373 aa)    
Predicted Functional Partners:
IF1G_05975
GPI-anchor biosynthesis protein PIG-F.
     
 0.815
IF1G_02089
3-ketodihydrosphingosine reductase.
     
 0.815
IF1G_02519
Alkaline phytoceramidase.
    
 0.666
IF1G_06003
Sphingosine-1-phosphate phosphohydrolase.
    
 0.639
IF1G_06319
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
    
 0.600
IF1G_07091
Sphinganine hydroxylase Sur2; Belongs to the sterol desaturase family.
   
 0.587
IF1G_10718
Ceramide glucosyltransferase.
     
 0.563
IF1G_07594
Sphingosine kinase.
     
 0.563
IF1G_09167
Type I phosphodiesterase / nucleotide pyrophosphatase family protein.
    
 0.512
IF1G_10981
Nmra-like protein.
   
 0.494
Your Current Organism:
Cordyceps javanica
NCBI taxonomy Id: 43265
Other names: C. javanica, CBS 134.22, Cordyceps javanica (Frieder. & Bally) Kepler, B. Shrestha & Spatafora, 2017, Isaria javanica, Isaria javanicus, Paecilomyces javanica, Paecilomyces sp. ARSEF 3776, Paecilomyces sp. ARSEF 3778, Spicaria javanica
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