STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5792_30665Unannotated protein. (395 aa)    
Predicted Functional Partners:
A5779_14665
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.850
A5792_18055
Unannotated protein.
  
     0.748
GCA_001403655_03911
Unannotated protein.
  
     0.731
A5792_03110
Unannotated protein.
  
     0.725
A5792_30280
Unannotated protein.
  
     0.724
A5792_24655
Unannotated protein.
  
     0.700
GCA_001403655_06190
Unannotated protein.
  
     0.693
A5792_30655
Unannotated protein.
 
     0.679
GCA_001403655_05382
Unannotated protein.
  
     0.679
A5792_03590
Unannotated protein.
  
     0.675
Your Current Organism:
Mycolicibacterium peregrinum
NCBI taxonomy Id: 43304
Other names: ATCC 14467, CCUG 27976, CIP 105382, DSM 43271, JCM 12142, M. peregrinum, Mycobacterium fortuitum biovar peregrinum, Mycobacterium peregrinum, NCTC 10264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.