Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A5779_20525 | A5792_02555 | GCA_001403655_00899 | GCA_001403655_03852 | Unannotated protein. | Unannotated protein. | 0.560 |
A5779_20525 | A5792_07205 | GCA_001403655_00899 | GCA_001403655_00893 | Unannotated protein. | Unannotated protein. | 0.541 |
A5779_20525 | A5792_07215 | GCA_001403655_00899 | GCA_001403655_00895 | Unannotated protein. | Unannotated protein. | 0.615 |
A5779_20525 | A5792_07220 | GCA_001403655_00899 | GCA_001403655_00896 | Unannotated protein. | Unannotated protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.844 |
A5779_20525 | A5792_07225 | GCA_001403655_00899 | GCA_001403655_00897 | Unannotated protein. | Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.817 |
A5779_20525 | A5792_07230 | GCA_001403655_00899 | GCA_001403655_00898 | Unannotated protein. | Unannotated protein. | 0.762 |
A5779_20525 | A5792_07245 | GCA_001403655_00899 | GCA_001403655_00901 | Unannotated protein. | Unannotated protein. | 0.697 |
A5779_20525 | A5792_07250 | GCA_001403655_00899 | GCA_001403655_00902 | Unannotated protein. | Unannotated protein. | 0.743 |
A5779_20525 | def | GCA_001403655_00899 | GCA_001403655_00900 | Unannotated protein. | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.712 |
A5779_20525 | mshD | GCA_001403655_00899 | GCA_001403655_05443 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.492 |
A5792_02555 | A5779_20525 | GCA_001403655_03852 | GCA_001403655_00899 | Unannotated protein. | Unannotated protein. | 0.560 |
A5792_02555 | mshD | GCA_001403655_03852 | GCA_001403655_05443 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.453 |
A5792_07205 | A5779_20525 | GCA_001403655_00893 | GCA_001403655_00899 | Unannotated protein. | Unannotated protein. | 0.541 |
A5792_07205 | A5792_07220 | GCA_001403655_00893 | GCA_001403655_00896 | Unannotated protein. | Unannotated protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily. | 0.610 |
A5792_07205 | A5792_07225 | GCA_001403655_00893 | GCA_001403655_00897 | Unannotated protein. | Unannotated protein; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.541 |
A5792_07205 | A5792_07230 | GCA_001403655_00893 | GCA_001403655_00898 | Unannotated protein. | Unannotated protein. | 0.541 |
A5792_07205 | A5792_07245 | GCA_001403655_00893 | GCA_001403655_00901 | Unannotated protein. | Unannotated protein. | 0.541 |
A5792_07205 | A5792_07250 | GCA_001403655_00893 | GCA_001403655_00902 | Unannotated protein. | Unannotated protein. | 0.456 |
A5792_07205 | def | GCA_001403655_00893 | GCA_001403655_00900 | Unannotated protein. | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.541 |
A5792_07215 | A5779_20525 | GCA_001403655_00895 | GCA_001403655_00899 | Unannotated protein. | Unannotated protein. | 0.615 |
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