STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5792_04230Unannotated protein. (224 aa)    
Predicted Functional Partners:
A5792_09795
Unannotated protein.
 
   
 0.936
A5792_04225
Unannotated protein.
  
 
 0.931
A5792_12010
Unannotated protein.
  
 
 0.863
A5792_07765
Unannotated protein.
  
 
 0.863
rpsA
Unannotated protein.
 
    0.772
A5779_23475
Unannotated protein.
   
    0.657
atpD
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
   
    0.653
A5792_06585
Unannotated protein.
  
 
 0.618
atpC
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
    0.576
A5792_22885
Unannotated protein.
  
  
  0.540
Your Current Organism:
Mycolicibacterium peregrinum
NCBI taxonomy Id: 43304
Other names: ATCC 14467, CCUG 27976, CIP 105382, DSM 43271, JCM 12142, M. peregrinum, Mycobacterium fortuitum biovar peregrinum, Mycobacterium peregrinum, NCTC 10264
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.