STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5792_29000Unannotated protein. (374 aa)    
Predicted Functional Partners:
A5792_29005
Unannotated protein.
 
 
 0.999
A5792_29010
Unannotated protein.
 
 
 0.999
GCA_001403655_03051
Unannotated protein.
 
  
 0.985
GCA_001403655_03050
Unannotated protein.
 
  
 0.981
hypA
Unannotated protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.958
GCA_001403655_03049
Unannotated protein.
 
   
 0.905
A5792_29015
Unannotated protein.
 
   
 0.899
ureG
Unannotated protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
  
 0.716
GCA_001403655_03043
Unannotated protein.
 
   
 0.609
A5792_03375
Unannotated protein.
       0.541
Your Current Organism:
Mycolicibacterium peregrinum
NCBI taxonomy Id: 43304
Other names: ATCC 14467, CCUG 27976, CIP 105382, DSM 43271, JCM 12142, M. peregrinum, Mycobacterium fortuitum biovar peregrinum, Mycobacterium peregrinum, NCTC 10264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.