STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5792_26735Unannotated protein. (342 aa)    
Predicted Functional Partners:
A5779_09530
Unannotated protein.
 
     0.934
A5792_21200
Unannotated protein.
  
 0.920
pyrD
Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
       0.876
A5792_09605
Unannotated protein.
  
 
 0.849
GCA_001403655_04688
Unannotated protein.
  
 0.797
A5792_09890
Unannotated protein.
 
   
 0.777
A5792_17795
Unannotated protein.
  
     0.769
A5792_28975
Unannotated protein.
  
     0.766
A5792_27005
Unannotated protein.
  
     0.765
A5792_18045
Unannotated protein.
  
     0.761
Your Current Organism:
Mycolicibacterium peregrinum
NCBI taxonomy Id: 43304
Other names: ATCC 14467, CCUG 27976, CIP 105382, DSM 43271, JCM 12142, M. peregrinum, Mycobacterium fortuitum biovar peregrinum, Mycobacterium peregrinum, NCTC 10264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.