STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5792_17460Unannotated protein. (731 aa)    
Predicted Functional Partners:
GCA_001403655_04863
Unannotated protein.
  
     0.544
A5792_28230
Unannotated protein.
      
 0.504
GCA_001403655_04909
Unannotated protein.
       0.490
A5792_24005
Unannotated protein.
  
     0.485
A5792_28710
Unannotated protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.477
GCA_001403655_03092
Unannotated protein.
    
   0.477
A5792_30155
Unannotated protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.477
A5779_01300
Unannotated protein; Belongs to the small heat shock protein (HSP20) family.
    
   0.477
A5792_15740
Unannotated protein.
 
     0.444
A5792_14775
Unannotated protein.
  
     0.437
Your Current Organism:
Mycolicibacterium peregrinum
NCBI taxonomy Id: 43304
Other names: ATCC 14467, CCUG 27976, CIP 105382, DSM 43271, JCM 12142, M. peregrinum, Mycobacterium fortuitum biovar peregrinum, Mycobacterium peregrinum, NCTC 10264
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.