Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A5792_02855 | A5792_02860 | GCA_001403655_06490 | GCA_001403655_06489 | Unannotated protein. | Unannotated protein. | 0.918 |
A5792_02855 | A5792_02870 | GCA_001403655_06490 | GCA_001403655_06488 | Unannotated protein. | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.703 |
A5792_02855 | A5792_02875 | GCA_001403655_06490 | GCA_001403655_06487 | Unannotated protein. | Unannotated protein. | 0.808 |
A5792_02860 | A5792_02855 | GCA_001403655_06489 | GCA_001403655_06490 | Unannotated protein. | Unannotated protein. | 0.918 |
A5792_02860 | A5792_02870 | GCA_001403655_06489 | GCA_001403655_06488 | Unannotated protein. | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.713 |
A5792_02860 | A5792_02875 | GCA_001403655_06489 | GCA_001403655_06487 | Unannotated protein. | Unannotated protein. | 0.845 |
A5792_02870 | A5792_02855 | GCA_001403655_06488 | GCA_001403655_06490 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein. | 0.703 |
A5792_02870 | A5792_02860 | GCA_001403655_06488 | GCA_001403655_06489 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein. | 0.713 |
A5792_02870 | A5792_02875 | GCA_001403655_06488 | GCA_001403655_06487 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein. | 0.869 |
A5792_02870 | GCA_001403655_05070 | GCA_001403655_06488 | GCA_001403655_05070 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein. | 0.665 |
A5792_02870 | dapB | GCA_001403655_06488 | GCA_001403655_02420 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.806 |
A5792_02870 | eno | GCA_001403655_06488 | GCA_001403655_04971 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.683 |
A5792_02870 | orn | GCA_001403655_06488 | GCA_001403655_04243 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.808 |
A5792_02870 | pnp | GCA_001403655_06488 | GCA_001403655_02411 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.918 |
A5792_02870 | rph | GCA_001403655_06488 | GCA_001403655_04439 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.768 |
A5792_02870 | whiB-3 | GCA_001403655_06488 | GCA_001403655_01778 | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Unannotated protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.683 |
A5792_02875 | A5792_02855 | GCA_001403655_06487 | GCA_001403655_06490 | Unannotated protein. | Unannotated protein. | 0.808 |
A5792_02875 | A5792_02860 | GCA_001403655_06487 | GCA_001403655_06489 | Unannotated protein. | Unannotated protein. | 0.845 |
A5792_02875 | A5792_02870 | GCA_001403655_06487 | GCA_001403655_06488 | Unannotated protein. | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.869 |
GCA_001403655_05070 | A5792_02870 | GCA_001403655_05070 | GCA_001403655_06488 | Unannotated protein. | Unannotated protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.665 |
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