STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5792_25620Unannotated protein. (306 aa)    
Predicted Functional Partners:
A5792_09605
Unannotated protein.
   
 0.810
A5792_00170
Unannotated protein.
  
 0.786
A5792_31425
Unannotated protein.
  
 0.786
A5792_25205
Unannotated protein.
  
 0.786
A5792_07550
Unannotated protein.
  
 
 0.641
GCA_001403655_05592
Unannotated protein.
   
 0.626
A5792_01660
Unannotated protein.
  
 0.602
A5792_08080
Unannotated protein.
  
     0.591
GCA_001403655_00975
Unannotated protein.
  
     0.562
A5779_07535
Unannotated protein.
       0.554
Your Current Organism:
Mycolicibacterium peregrinum
NCBI taxonomy Id: 43304
Other names: ATCC 14467, CCUG 27976, CIP 105382, DSM 43271, JCM 12142, M. peregrinum, Mycobacterium fortuitum biovar peregrinum, Mycobacterium peregrinum, NCTC 10264
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.