STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5LSK760S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (232 aa)    
Predicted Functional Partners:
A0A4U5LSJ2
Uncharacterized protein.
   
 0.999
A0A4U5MA00
Ribos_L4_asso_C domain-containing protein.
  
 0.999
A0A4U5MBB5
40S ribosomal protein S28.
   
 
 0.999
A0A4U5MHZ8
Uncharacterized protein.
   
 
 0.999
A0A4U5MPE7
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
A0A4U5MPJ4
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
A0A4U5MW89
60S ribosomal protein L26B.
  
 0.999
A0A4U5MYU9
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.999
A0A4U5MYZ6
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.999
A0A4U5N8M4
60S ribosomal protein L26B.
  
 0.999
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.