STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5LSQ3LEA_2 domain-containing protein. (248 aa)    
Predicted Functional Partners:
A0A4U5PUP9
Protein ROOT PRIMORDIUM DEFECTIVE 1.
  
     0.512
A0A4U5QZE9
Uncharacterized protein.
  
     0.467
A0A4U5QID4
Uncharacterized protein.
  
     0.464
A0A4V6A8H7
Uncharacterized protein.
  
     0.461
A0A4U5PRG7
Uncharacterized protein.
  
     0.455
A0A4U5P2Z5
Uncharacterized protein.
  
     0.454
A0A4U5QCD6
Cupin type-1 domain-containing protein.
  
     0.452
A0A4U5PNR9
Putative glucosyltransferase family protein.
  
     0.448
A0A4V6A5I0
Uncharacterized protein.
  
     0.448
A0A4U5N0B2
DUF641 domain-containing protein.
  
     0.445
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.