STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5LSQ7LRRNT_2 domain-containing protein. (215 aa)    
Predicted Functional Partners:
A0A4U5QLU0
Putative LRR receptor-like serine/threonine-protein kinase.
  
 
  0.563
A0A4U5P596
Elongation factor 1-gamma.
    
  0.505
A0A4U5QJ24
Putative small nuclear ribonucleoprotein F.
    
  0.460
A0A4U5NMK4
Uncharacterized protein.
  
 
  0.456
A0A4U5QWW6
TYROSINE PHOSPHATASE 1 family protein.
    
 0.429
A0A4U5N966
BRI1 kinase inhibitor 1-like.
    
 0.414
A0A4U5Q035
BRI1 kinase inhibitor 1-like.
    
 0.414
A0A4U5MZ15
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.409
A0A4U5Q0W8
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.409
A0A4U5MYH1
LRRNT_2 domain-containing protein.
  
     0.408
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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