STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5M4X0Dynein light chain. (128 aa)    
Predicted Functional Partners:
A0A4U5Q4W8
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.694
A0A4U5MHR6
Uncharacterized protein.
    
 0.688
A0A4U5Q7T5
Uncharacterized protein.
    
 0.688
A0A4U5QCZ5
Autophagy protein Apg6.
    
 0.671
A0A4U5MI62
Phosphatidylinositol 3-kinase family protein; Belongs to the PI3/PI4-kinase family.
     
 0.650
A0A4U5MPT6
Ankyrin repeat family protein.
    
 0.567
A0A4U5Q0E4
ANK_REP_REGION domain-containing protein.
    
 0.567
A0A4U5QKP4
Ankyrin-1.
    
 0.567
A0A4U5QLX6
Two pore calcium channel protein 1.
    
  0.550
A0A4U5LT27
Protein trichome birefringence-like 6.
    
 0.548
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.