STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4U5M586PB1 domain-containing protein. (651 aa)    
Predicted Functional Partners:
A0A4U5R1S5
ACT domain-containing family protein.
      
 0.557
A0A4V6ABZ0
ACT domain-containing family protein.
      
 0.557
A0A4V6A9T3
Uncharacterized protein.
  
     0.509
A0A4U5QTZ4
Uncharacterized protein.
  
     0.508
A0A4U5LSP7
Protein FAF-like, chloroplastic.
  
     0.496
A0A4U5QL25
Uncharacterized protein.
  
     0.491
A0A4U5QY63
Uncharacterized protein.
  
     0.491
A0A4U5QAZ7
Uncharacterized protein.
  
     0.486
A0A4U5QWI9
Uncharacterized protein.
  
     0.486
A0A4U5QR20
Uncharacterized protein.
  
     0.485
Your Current Organism:
Populus alba
NCBI taxonomy Id: 43335
Other names: P. alba, Populus alba L., abele, gin-doro, silver-leaf poplar, white poplar, xin bai yang
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.